Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015805311.1_cds_XP_016493017.1_8317
CDS Infomation

[gene=LOC107812429] [db_xref=GeneID:107812429] [protein=SMR domain-containing protein At5g58720-like] [protein_id=XP_016493017.1] [location=complement(join(5098..5229,5429..5499,5602..5708,5794..5861,6961..7017,7125..7201,7722..7960,8760..8845,10304..10414,11758..11783,12438..12990))] [gbkey=CDS]
Sequence

ATGAAGCACCAGAAGAAGAAGAAGAAGAGATCAAAAGCTTCTAAACAAGGCGATGTTGTT
AATGGTTCTGACAATAGCAAAGTAGGGGAGAATAGTGTTTTAAAGGTTTTAACGGATGCG
TTTAGCTCTGTATCTATAGAGGAAGCAGAATGTGCTTATAAAGAGGCAAATGGAAACTTG
AACAAAGCGATGAATATTCTGAGTGATTTGCTGGAGCATAGGGAAGAGGATAAGATCACG
AGTTGCTCGAGCTCGAGTGGGAATATTGGGTCGAGCTTGGATTCGAGTAACAACTCGGAC
ATGTTTGTTGGGGGTCAATCACTGCAAAACTCAGCTCAGCGCAAGGCTAAGACGAAGAAA
TTGGTAGCTGCTACAGGAACAGTCTCAGTGATGATAGGGAAGGATTACGTGAGGTCAATT
CCGAAGAAGAGTTGTTCAAAATTCAAGAGTTTAAGTGATGAAACGGCGAGCAATGATGAT
GTTGAGCAGTTTTTGTGTTCCATGCTTGGGGAGGACTCTGATTTGAGCTTAGCTGTCGTC
AGAGATGTTCTATGTCAATGCGGATACGAAGTTGAGAAGGCTCTGAGTGTGCTGCTTGAA
TTATCAGCTTCCTCTAATGAGCAACCTAAGTTTAGCGACTATAGTGCAAGCAGCAAAGAA
GAGGCAGTGTCTCTTCATTCAAGTGATGGTTTTACTGATAGGACATCTGATTCTACTTCT
CATTCATCTGAAGGGGAATTTCAAGATAATGTGTGGTTTTGGGGGCATCCTGGCAGGAAT
CAGTCAAAAAGTCTTGCAGGAAATTTCGCGCATTCTTCATCATCTACATCAGGAAATTCT
GGGCCAGAACTTCCTCACGAGATCTTGGAATCTTTGTTTAATATGCCAACCCCCAAGAGT
GCTGAGCACGAACCAACTACTATGAACTGGAAGAATGTAGTGAAGAAAATGACATCTTTG
GGACGAAGGTTTGAATCTTGTCCTAATGATATTCCACCGCCGCAGCATATCAATGATGAG
GGAGCTGAGTATCATCTGTTCCGTGAAGCTTCAAAGCAACACTGGGAGTCAATGAAATCC
CATTATCAGAAGGCTACAACAGCTTTTTCAAATGGCCAGAAGGAATATGCTGCCTATCTT
GCAGATCAGGGCAGGCTACATAACAGAAAGGCTCAAGAAGCTGATGAGAAAGCTAGCCAG
GATATATTTGCAGCCAGAAACAAGAACATAGAAAACATGATAACTATTGATTTGCATGGT
CAACATGTTAAACCAGCAATGAGGCTTATGAAGCTTCACCTTCTGTTTGGTGCATATGTA
CGATCTGTTCGGTTGTTCAGGGTTATCACAGGATGCGGGATGCATGGAGTTGGGAAGTCA
AAACTGAAAAATTCTGTAATTGAGCTTTTGAAGAAAGAACGTATTGAATGGACTGAGGAG
AATAGAGGAACATTGCTCATCAAGCTCGATGGAGGAATGAATTTTAGCTTTCTAGATTCT
AATGATGATGATGATGATGATAGCTGA

Peptide Sequence

PEP ID

XP_016493017.1
PEP Infomation

PREDICTED: SMR domain-containing protein At5g58720-like [Nicotiana tabacum]
Sequence

MKHQKKKKKRSKASKQGDVVNGSDNSKVGENSVLKVLTDAFSSVSIEEAECAYKEANGNL
NKAMNILSDLLEHREEDKITSCSSSSGNIGSSLDSSNNSDMFVGGQSLQNSAQRKAKTKK
LVAATGTVSVMIGKDYVRSIPKKSCSKFKSLSDETASNDDVEQFLCSMLGEDSDLSLAVV
RDVLCQCGYEVEKALSVLLELSASSNEQPKFSDYSASSKEEAVSLHSSDGFTDRTSDSTS
HSSEGEFQDNVWFWGHPGRNQSKSLAGNFAHSSSSTSGNSGPELPHEILESLFNMPTPKS
AEHEPTTMNWKNVVKKMTSLGRRFESCPNDIPPPQHINDEGAEYHLFREASKQHWESMKS
HYQKATTAFSNGQKEYAAYLADQGRLHNRKAQEADEKASQDIFAARNKNIENMITIDLHG
QHVKPAMRLMKLHLLFGAYVRSVRLFRVITGCGMHGVGKSKLKNSVIELLKKERIEWTEE
NRGTLLIKLDGGMNFSFLDSNDDDDDDS

Transcript Sequence

Gene sequence data has not been registered.